Full text in pdf format

 

Satellite DNA in species of the genus Oryzomys (Rodentia, Cricetidae)

 

 

Lidia Vidal-Rioja; Daniel Corach; Juan Padrón

Departamento de Citogenética Molecular, IMBICE, Casilla Postal 403, 1900 La Plata, Argentina. Send correspondence to L.V.-R.

 

 


ABSTRACT

The DNA from cricetid rodents of the genus Oryzomys (O. flavescens, O. longicaudatus longicaudatus, and O. 1. magellanicus) was investigated. CsC1 gradient centrifugations were performed with total DNA, total DNA combined with the dye Hoechst 33258 and with fast reassociated DNA isolated from hydroxyapatite columns. Thermal denaturations were carried out on total native DNA. In the three species some 7%; of total DNA appeared as a highly repetitive satellite rich in A-T bases. In each species, bulk DNA and satellite melted as two different thermal components. First derivative analysis of the melting profiles showed minor differences in the Tm and melting transition intervals of the minor components. These differences were statistically significant between O. flavescens and each O. longicaudatus and non-significant between the two subspecies of O. longicaudatus. Compositional features of the satellite would suggest a common origin prior to the divergence of the three Oryzomys forms. It is assumed that along with the chromosomal diversification and geographical isolation of the species some sequence divergence of the satellite DNAs may have also occurred.

Keywords: satellite DNA; Oryzomys.


 

 

REFERENCES

Arrighi, F.E., Mandel, M., Bergendahl, J. and Hsu, T.C. (1970). Buoyant densities of DNA of mammals. Biochem. Genet. 4: 367.

Britten, R.J., Graham, D.E. and Neufeld, B.R. (1974). Analysis of repeating DNA sequences by reassociation. In: Methods in Enzymology 29 (Grossman, L. and Moldave, K., eds.) Academic Press, New York, pp. 363-406.

Brown, S.D. and Dover, G.A. (1979). Conservation of sequences in related genomes of Apodeazus: constraints on the maintenance of satellite DNA sequences. Nucleic Acids Res. 6: 2423-2423.

Cabrera, A. (1961). Catálogo de los Mamíferos de América del Sur. Mus. Arg. Cienc. Nat. "Bernar

Corach, D., Bianchi, N.O. and Vidal-Rioja, L. (1987). DNA characteristics in species of Calomys (Rodentia, Cricetidae). Cytologia (in press). dino Rivadavia", T. IV, N? 2:448.

Gardner, A.L. and Patton, J.L. (1976). Karyotypic variation in oryzomyine rodents (Cricetinae) with comments on chromosomal evolution in the neotropical cricetine complex. Occas. Pap. Mus. ZooL Louisiana State Univ., N9 49, pp. 1-48.

Hennig, W. and Walker, P.M.B. (1970). Variations in the DNA from two rodent families (Cricetidae, Muridae). Nature 225: 915-919.

Huguet, T. and Jouanin, L. (1971). The heterogeneity of wheat nuclear DNA. Biochim. Biophys. Acta 262: 431-440.

Hooper, E.T. and Musser, G.G. (1964). The glans penis in Neotropical Cricetines (Family Muridae) with comments on classification of Muroid rodents. Misc. PubL Mus. ZooL Univ. Michigan, N? 123.

Mandel, M., Schildkraut, C.L. and Marmur, J. (1968). Use of CsC1 density gradient analysis for determining the guanine plus cytosine content of DNA. In: Methods in Enzymology 12 (Grossman, L. and Moldave, K., eds.).Academic Press, New York, pp. 184-195.

Mandel, M. and  Mannur, J. (1968). Use of ultraviolet absorbance-temperature profile for determining the guanine plys cytosone content of DNA. In: Methods in Enzymology, 12(Grossman, L. and Moldave, K., eds.). Academic Press, New York, pp. 195-206.

Mandel, M. (1969). New approaches to bacterial taxonomy: perspective and prospects. Ann. Rev.MicrobioL 23: 239-279.

Manuelidis, L. (1977). A simplified method for preparation of mouse satellite DNA. Anal. Biochem. 78:561-568.

Mazrimas, J.A. and Hatch, F.T. (1972). A possible relationship between satellite DNA and  the evolution of the kangaroo rat species (Genus Dipodomys). Nature New Biol. 240: 102-105.

Musto, H., Heguy, A. and Wettstein, R. (1981). DNA analysis of five species of the Cricetidae family. Arch. BioL Med. Exper. (Chile) 14: 73 (Abstract).

Olmo, E. (1981). Evolution of genome size and DNA base composition in reptiles. Genetica 57: 39-50.

Reig, O. (1977). A proposed unified nomenclature of the enamelled components of the molar teeth of the Cricetidae (Rodentia). J. Zool. Lond. 181: 227-241.

Reig, O. (1980). A new fossil genus of South America cricetid rodents allied to Wiedomys with an assessment of the Sigmodontinae. J. Zool. Lond. 192: 257-281.

Vidal-Rioja, L., Semorile, L. and Bianchi, N.O. (1979). DNA of Akodon (Rodentia, Cricetidae). I. Biophysical characterization. Biochem. Genet. 17: 297-303.

Vidal-Rioja, L., Bianchi, N.O., Catalá, A. and Semorile, L. (1982). DNA of Akodon (Rodentia, Cricetidae). II. Molecular hybridization of repetitive DNA sequences. Can. J. Genet. Cytol. 24: 601-609.